BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030C01LP1|AL429178
(912 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig831 1774 0.0
>3x_Contig831
Length = 2020
Score = 1774 bits (894), Expect = 0.0
Identities = 903/905 (99%), Gaps = 2/905 (0%)
Strand = Plus / Plus
Query: 1 gatcaatgcgatgcgatgagctttcattatcaaattttcgcatattgcaggaaattatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatcaatgcgatgcgatgagctttcattatcaaattttcgcatattgcaggaaattatgt 440
Query: 61 tacccggcactcattgttagtttctttttcctttaagattcattcttagttcgggtaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tacccggcactcattgttagtttctttttcctttaagattcattcttagttcgggtaata 500
Query: 121 ttgttgccatggccattttcatcacgtgatttgatagtttatatcaaagtgcataggcgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgttgccatggccattttcatcacgtgatttgatagtttatatcaaagtgcataggcgt 560
Query: 181 ttccatgtaccatttaatgggagaccgaccacgttgtagtaatcaccgttgaccttctta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttccatgtaccatttaatgggagaccgaccacgttgtagtaatcaccgttgaccttctta 620
Query: 241 ataagacagccactgaaaccttgcactttgaaaccacccgcaacttgtaagccgtcaccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ataagacagccactgaaaccttgcactttgaaaccacccgcaacttgtaagccgtcaccg 680
Query: 301 ctttccacgtacatctcaactatcgaccttgggatattactgtcgaagtatacctccgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctttccacgtacatctcaactatcgaccttgggatattactgtcgaagtatacctccgtc 740
Query: 361 tgttcataaaaggaatcaaagctgtattcttgtggtgtgttgtatatgataatagtaaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgttcataaaaggaatcaaagctgtattcttgtggtgtgttgtatatgataatagtaaca 800
Query: 421 gcggtaatgaccctcatcggtttcccggattgagtgaatctgagcaggtttcgtagttgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gcggtaatgaccctcatcggtttcccggattgagtgaatctgagcaggtttcgtagttgg 860
Query: 481 atttctttctctacaggtttctcgtagatctcatcggtgtggtctactacaattgtatcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 atttctttctctacaggtttctcgtagatctcatcggtgtggtctactacaattgtatcg 920
Query: 541 gcacataataccaatttcgatttacttcctggagtcaattcttggagtatgctctttgcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 gcacataataccaatttcgatttacttcctggagtcaattcttggagtatgctctttgcc 980
Query: 601 ttctccttacatgtgtcttggacgtaatcgcttggccttttgacatacaaggatttatca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 981 ttctccttacatgtgtcttggacgtaatcgcttggccttttgacatacaaggatttatca 1040
Query: 661 agatcttcctcgaagctgggtttcatgacttttatgttgtcaaatcccatttgttccgtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1041 agatcttcctcgaagctgggtttcatgacttttatgttgtcaaatcccatttgttccgtt 1100
Query: 721 aaaatctcaaatcttcgtggagaagatgatgccagaatgatttcatacttatcagtcaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1101 aaaatctcaaatcttcgtggagaagatgatgccagaatgatttcatacttatcagtcaat 1160
Query: 781 ttttgtgacagtggattcatatttcgttgtagtggtggtgcctatcctactgctcttgtt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1161 ttttgtgacagtggattcatatttcgttgtagtggtggtgcctatcctactgctcttgtt 1220
Query: 841 cttcctttcgatactctatgctggttgtgatcaacc--aaaaaaaatattcactattacc 898
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1221 cttcctttcgatactctatgctggttgtgatcaacccaaaaaaaaatattcactattacc 1280
Query: 899 ggata 903
|||||
Sbjct: 1281 ggata 1285
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7190
Number of Sequences: 1807
Number of extensions: 7190
Number of successful extensions: 64
Number of sequences better than 1.0e-20: 1
length of query: 912
length of database: 10,358,551
effective HSP length: 16
effective length of query: 896
effective length of database: 10,329,639
effective search space: 9255356544
effective search space used: 9255356544
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)